These low FODMAP zucchini muffins are soft, fluffy, and full of cozy spice. Grated zucchini keeps them moist without adding FODMAPs. With a base of gluten-free flour and the option to add FODMAP-friendly nuts or dark chocolate, they’re a perfect everyday snack or breakfast. Great for using up garden zucchini and gentle on your gut.
Ingredients Needed:
- 2 large eggs: bind and lift the batter.
- 1⅓ cups sugar (270g): sweetens and helps texture.
- 2 tsp vanilla extract: adds flavor depth.
- 3 cups grated zucchini (360g): use fresh and squeeze out excess liquid.
- ¾ cup unsalted butter, melted: makes muffins tender.
- 2¾ cups gluten-free flour (400g): use a grain-based low FODMAP blend.
- 1 tsp baking soda
- 1 tsp baking powder
- 2 tsp cinnamon
- 1 tsp ground ginger
- ½ tsp nutmeg
- ¼ tsp kosher salt
- 1 cup walnuts or dark chocolate chips (optional): skip raisins or cranberries for FODMAP safety.
How To Make Low FODMAP Zucchini Muffins:
Preheat & Prep Pan:
Preheat oven to 350°F (175°C). Grease a 12–18 muffin pan or line with paper cups.
Make the Batter:
In a large bowl, beat the eggs. Stir in sugar, vanilla, grated zucchini, and melted butter.
Mix Dry Ingredients:
In a separate bowl, whisk together gluten-free flour, baking soda, baking powder, cinnamon, ginger, nutmeg, and salt.
Combine:
Stir dry ingredients into wet. Mix gently until just combined. Fold in walnuts or dark chocolate if using.
Fill Muffin Cups:
Spoon batter into prepared muffin tins, filling each cup to the top.
Bake:
Bake for 22–30 minutes until golden brown and a toothpick comes out clean.
Cool:
Cool in pan for 5 minutes, then transfer to wire rack to cool completely.

Recipe Tips:
- Squeeze zucchini to remove excess water – it helps the texture.
- Use a low FODMAP gluten-free flour – avoid grain-free blends.
- Add dark chocolate or walnuts for a little crunch – skip dried fruit.
- Don’t overmix or muffins may turn dense.
How to Store & Reheat:
- Room Temperature: Store in airtight container up to 3 days.
- Fridge: Lasts 5 days.
- Freezer: Freeze up to 2 months. Thaw overnight or warm gently in microwave.
Nutrition Facts (per muffin, approx):
- Calories: 220
- Sodium: 160 mg
- Protein: 4 g
- Fat: 10 g
- Carbs: 28 g
- Fibre: 2 g
- Sugar: 12 g
FAQs:
Are zucchini muffins low FODMAP?
Yes – when made with gluten-free flour, no dried fruit, and in moderate portions.
What can I add instead of raisins?
Try dark chocolate chips, chopped walnuts, or a handful of blueberries.
Can I make these dairy-free?
Yes – swap butter for melted coconut oil or a neutral oil like canola.
Can I reduce the sugar?
Yes! You can use ¾–1 cup sugar or a low FODMAP sweetener like maple syrup.
Is all-purpose flour low FODMAP?
No – use a grain-based gluten-free blend to stay FODMAP-compliant.
Try More Recipes:
Low FODMAP Zucchini Muffins
Course: BreakfastCuisine: AmericanDifficulty: Easy12-18
servings10
minutes30
minutes220
kcalSoft, spiced muffins with grated zucchini and gluten-free flour – a tummy-friendly treat that’s perfect for breakfast or snacks.
Ingredients
2 large eggs
1⅓ cups sugar (270g)
2 tsp vanilla extract
3 cups grated zucchini (squeezed dry)
¾ cup melted unsalted butter
2¾ cups gluten-free flour (grain-based)
1 tsp baking soda
1 tsp baking powder
2 tsp cinnamon
1 tsp ground ginger
½ tsp nutmeg
¼ tsp kosher salt
1 cup walnuts or dark chocolate chips (optional)
Directions
- Preheat oven to 350°F (175°C). Grease or line muffin tins.
- Beat eggs in a large bowl. Add sugar, vanilla, zucchini, and butter.
- In another bowl, whisk dry ingredients.
- Mix dry into wet until just combined.
- Fold in nuts or chocolate if using.
- Divide batter into muffin tins.
- Bake 22–30 minutes until golden and a toothpick comes out clean.
- Cool in pan for 5 minutes, then cool completely.
